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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015863298.1_cds_XP_016515628.1_27956
CDS Infomation

[gene=LOC107832319] [db_xref=GeneID:107832319] [protein=primary amine oxidase-like] [protein_id=XP_016515628.1] [location=complement(join(29456..29615,29932..30473,30755..30868,30954..32108))] [gbkey=CDS]
Sequence

ATGGAGTTCATAAAAGTAGTGTCCACATCTTTTACTCTTACAATTATTGCTATTGTCTTC
TTGTTCTTTTCCACTAGATGCCAATGCCATCCTTTAGACCCTCTAAATCCTATTGAGATC
AACAAGATTAGAGTCATTATTCAAAAATCTCATTTTAGTTCCCTCTCCAATTTAACATTT
CACTTTGTTGACATTGAAGAGCCTGAAAAAAAAGATGTCCTTCATTGGATGTACTTACAT
TATAAGCATAAAAATGTTCCTTTTCCTTATCGTCGAGCCAGGGTAGTAGTTCGCGCAAAT
GGTGAGACGTTTGAAGTCGTTGTAGACTTGGCCACTCGCTCTATCATATCAGAAAATCTA
TATACTGGTCATGGTTTCCCTCCACTCACTCTCGACGAAATTGTACAATGCAGCAGGCTG
ACATTGAGGAATCCTAAATTTCAAGATTCAATATTGAAAAGGGGTTTGAATATATCAGAA
GTTAGTTGCATACCACAACCAGTTGGATGGTTCGGGCAGCCAAAGACACGAAGAATACTT
AACGTTCCATGTTTTTATCGACGAGGGACAACTAATTTTTGGGCAAGGCCAATTGAAGGG
ATCACTACAATAGTAGATGTTGAATCCATGAAGATAATCAAATATATAGATAGATTCAGA
GCCCCTTTGCCTGAAGCCGAGAGTGCTGATTTCCAAACATCGAGCCAGGGATCAGTCGCT
TGCAATGACACTGACACAAGCCGGATTATCATCAAAGGCAATGAAGTTAAATGGGATAAT
TGGATTTTTCACGTTGGATTCAACACGAGGGCGGGTATGATCGTGTCTACAGCTTCTATA
TTTGATGATACAAGAAATGAATATCGACGTGTGCTCTATAGAGGTCATGTATCAGAGACA
TTTGTGCCTTATATGGATCCTACATTTGAATGGTACTACAGGACTTTTATGGATATTGGT
GAATTTGGTTTCGGAAGGTCTGCTAGTAGTCTTGTCCCGTTGCTAGATTGTCCGAACAAT
GCAGTGTATATGGACGGATATATGGCTGATTCAGATGGACATGTAGTGCAAGTTCCCAAC
GCGATTTGCATATTTGAAAGATATGTTGGCGATGCTGCTTGGAGGCATACAGAAAATGGA
GTACCTGGAAATATAAACACTAAGGGACAGCAAGAAGTTAATTTGGTTGTTAGAATGGTT
GCAACAGTAGGAAATTATGATTATACACTTGATTGGGAGTTCAAACAAAGTGGAACTCTC
AGAGTTGGAGTAAGTTTGAGCGGAGTTATGGAGACGAAGGCTGTGAAATATACGAACAAT
AACCAAATAACTGAGGATGTTTACGGGACCCTTGTGGCGAAAAACACTATTGCAGCTAAC
CATGATCACTTCCTTATTTACTACCTTGATCTTGATATTGATGGTACTGATAATTCATTC
CTAAAAGCCAAACTGAAAACTAGAAGAGTGAAGGACTCAAAAATTTTACCTAGGAAGAGT
TATTGGAAAGCTGTTAAGGAAACTATGAAAACAGAAAATGAGGCTAAGACACACATAGGA
CTAGAACCAGCTGAATTGTTGATTGTAAATCCAAATAAGAAAACAAAGATTGGAAATGGT
GCATCTTATCGACTAATACCTAGTCGACCAGCCATGTCCTTGCTATCGTACGATGACTAC
CCTCAACTTCGAGCAGCTTATACAAAGTATCAACTGTGGGTGACACCATACAACAAATCA
GAAAGATGGGCCGGGGGATTCTACGCTGATAGGAGTCAAGGAGATGATGGCCTAGCAATC
TGGAGTCGCAGGAATAGGCATATTGCAAACAAGGATATTGTGCTTTGGTACACTGTTGGT
TTACATCATGTACCATGCCAAGAAGATTTTCCTGTAATGCCTTCAATTTATGATGGTTTC
GAGCTCCGGCCAACAAACTTCTTTGAAAGAAATCCATTGCTGAAACAATGA

Peptide Sequence

PEP ID

XP_016515628.1
PEP Infomation

PREDICTED: primary amine oxidase-like [Nicotiana tabacum]
Sequence

MEFIKVVSTSFTLTIIAIVFLFFSTRCQCHPLDPLNPIEINKIRVIIQKSHFSSLSNLTF
HFVDIEEPEKKDVLHWMYLHYKHKNVPFPYRRARVVVRANGETFEVVVDLATRSIISENL
YTGHGFPPLTLDEIVQCSRLTLRNPKFQDSILKRGLNISEVSCIPQPVGWFGQPKTRRIL
NVPCFYRRGTTNFWARPIEGITTIVDVESMKIIKYIDRFRAPLPEAESADFQTSSQGSVA
CNDTDTSRIIIKGNEVKWDNWIFHVGFNTRAGMIVSTASIFDDTRNEYRRVLYRGHVSET
FVPYMDPTFEWYYRTFMDIGEFGFGRSASSLVPLLDCPNNAVYMDGYMADSDGHVVQVPN
AICIFERYVGDAAWRHTENGVPGNINTKGQQEVNLVVRMVATVGNYDYTLDWEFKQSGTL
RVGVSLSGVMETKAVKYTNNNQITEDVYGTLVAKNTIAANHDHFLIYYLDLDIDGTDNSF
LKAKLKTRRVKDSKILPRKSYWKAVKETMKTENEAKTHIGLEPAELLIVNPNKKTKIGNG
ASYRLIPSRPAMSLLSYDDYPQLRAAYTKYQLWVTPYNKSERWAGGFYADRSQGDDGLAI
WSRRNRHIANKDIVLWYTVGLHHVPCQEDFPVMPSIYDGFELRPTNFFERNPLLKQ

Transcript Sequence

Gene sequence data has not been registered.